Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| short chain dehydrogenase | FBD94_09255 | Not Available | Positive | 2390330 - 2390932 | 21304.6 |
| hypothetical protein | FBD94_09260 | Not Available | Positive | 2390940 - 2391314 | 14561.1 |
| sdr family nad(p)-dependent oxidoreductase | FBD94_09265 | Not Available | Positive | 2391348 - 2392127 | 28541.0 |
| sdr family oxidoreductase | FBD94_09270 | Not Available | Positive | 2392141 - 2392893 | 26492.6 |
| hypothetical protein | FBD94_09275 | Not Available | Positive | 2392911 - 2393264 | 13139.9 |
| sdr family oxidoreductase | FBD94_09280 | Not Available | Positive | 2393282 - 2394046 | 26978.2 |
| helix-turn-helix domain-containing protein | FBD94_09285 | Not Available | Positive | 2394063 - 2394986 | 35665.6 |
| mfs transporter | FBD94_09290 | Not Available | Positive | 2395720 - 2396919 | 42140.2 |
| alkene reductase | FBD94_09295 | Not Available | Positive | 2396991 - 2399177 | 80210.6 |
| aldo/keto reductase | FBD94_09300 | Not Available | Positive | 2399200 - 2400183 | 35914.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

