Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3341 domain-containing protein | FBD94_09205 | Not Available | Negative | 2380533 - 2381030 | 18720.3 |
| plp-dependent aminotransferase family protein | FBD94_09210 | Not Available | Positive | 2381170 - 2382615 | 54294.4 |
| helix-turn-helix domain-containing protein | FBD94_09215 | Not Available | Positive | 2382765 - 2383604 | 32649.2 |
| carboxymuconolactone decarboxylase family protein | FBD94_09220 | Not Available | Positive | 2383811 - 2384362 | 19325.1 |
| alpha/beta hydrolase | FBD94_09225 | Not Available | Positive | 2384368 - 2385234 | 33334.2 |
| type i glyceraldehyde-3-phosphate dehydrogenase | FBD94_09230 | Not Available | Positive | 2385316 - 2386299 | 35559.7 |
| bacillithiol biosynthesis deacetylase bshb1 | FBD94_09235 | Not Available | Positive | 2386315 - 2387061 | 27549.0 |
| iclr family transcriptional regulator | FBD94_09240 | Not Available | Negative | 2387376 - 2388125 | 28580.9 |
| aldo/keto reductase | FBD94_09245 | Not Available | Positive | 2388191 - 2389144 | 35037.4 |
| type 1 glutamine amidotransferase domain-containing protein | FBD94_09250 | Not Available | Positive | 2389326 - 2390123 | 29148.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

