Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sulfatase | FBD94_09155 | Not Available | Negative | 2369706 - 2371247 | 59118.9 |
| gfo/idh/moca family oxidoreductase | FBD94_09160 | Not Available | Negative | 2371267 - 2372724 | 54133.6 |
| arylsulfatase | FBD94_09165 | Not Available | Negative | 2372751 - 2374280 | 55184.7 |
| hypothetical protein | FBD94_09170 | Not Available | Negative | 2374545 - 2375510 | 36602.2 |
| helix-turn-helix transcriptional regulator | FBD94_09175 | Not Available | Negative | 2375538 - 2375888 | 13413.5 |
| sdr family oxidoreductase | FBD94_09180 | Not Available | Positive | 2375993 - 2376736 | 25685.6 |
| histidine kinase | FBD94_09185 | Not Available | Negative | 2376811 - 2377881 | 40319.1 |
| winged helix-turn-helix transcriptional regulator | FBD94_09190 | Not Available | Positive | 2377985 - 2378878 | 33734.3 |
| hypothetical protein | FBD94_09195 | Not Available | Negative | 2379002 - 2379187 | 7144.07 |
| quinol:cytochrome c oxidoreductase | FBD94_09200 | Not Available | Negative | 2379208 - 2380476 | 48383.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

