Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_09005 | Not Available | Positive | 2322928 - 2323188 | 10238.7 |
| duf808 domain-containing protein | FBD94_09010 | Not Available | Negative | 2323237 - 2324112 | 31206.5 |
| hypothetical protein | FBD94_09015 | Not Available | Negative | 2324129 - 2324875 | 27730.2 |
| hypothetical protein | FBD94_09020 | Not Available | Positive | 2325314 - 2325955 | 24127.8 |
| duf4180 domain-containing protein | FBD94_09025 | Not Available | Positive | 2325987 - 2326334 | 13413.2 |
| hypothetical protein | FBD94_09030 | Not Available | Positive | 2326395 - 2327312 | 35070.5 |
| hypothetical protein | FBD94_09035 | Not Available | Positive | 2327479 - 2328366 | 31959.6 |
| nad(p)-dependent alcohol dehydrogenase | FBD94_09040 | Not Available | Negative | 2328472 - 2329515 | 37726.5 |
| rna polymerase sigma-70 factor | FBD94_09045 | Not Available | Positive | 2329702 - 2330274 | 22383.0 |
| duf4974 domain-containing protein | FBD94_09050 | Not Available | Positive | 2330350 - 2331468 | 41152.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

