Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | FBD94_08855 | Not Available | Negative | 2285425 - 2286444 | 37678.9 |
| pkd domain-containing protein | FBD94_08860 | Not Available | Negative | 2286446 - 2289961 | 127872.0 |
| response regulator | FBD94_08865 | Not Available | Negative | 2289988 - 2290455 | 18162.1 |
| rv1355c family protein | FBD94_08870 | Not Available | Positive | 2290562 - 2292877 | 86551.1 |
| hypothetical protein | FBD94_08875 | Not Available | Positive | 2292864 - 2293580 | 25999.4 |
| ghkl domain-containing protein | FBD94_08880 | Not Available | Positive | 2293577 - 2295733 | 81854.3 |
| hybrid sensor histidine kinase/response regulator | FBD94_08885 | Not Available | Positive | 2295747 - 2296826 | 40973.8 |
| response regulator | FBD94_08890 | Not Available | Positive | 2296816 - 2297226 | 15399.9 |
| hypothetical protein | FBD94_08895 | Not Available | Positive | 2297390 - 2297662 | 10502.6 |
| hypothetical protein | FBD94_08900 | Not Available | Negative | 2297664 - 2298566 | 34180.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

