Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | FBD94_08805 | Not Available | Negative | 2278326 - 2279012 | 24745.1 |
| membrane protein insertion efficiency factor yidd | FBD94_08810 | Not Available | Negative | 2279050 - 2279280 | 8593.66 |
| ribonuclease p protein component | FBD94_08815 | Not Available | Negative | 2279267 - 2279680 | 16153.8 |
| 50s ribosomal protein l34 | FBD94_08820 | Not Available | Negative | 2279744 - 2279902 | 6148.54 |
| response regulator | FBD94_08825 | Not Available | Negative | 2280015 - 2280752 | 27739.8 |
| sensor histidine kinase | FBD94_08830 | Not Available | Negative | 2280745 - 2281623 | 33685.3 |
| duf4288 domain-containing protein | FBD94_08835 | Not Available | Negative | 2281788 - 2282153 | 13963.4 |
| hypothetical protein | FBD94_08840 | Not Available | Negative | 2282165 - 2282938 | 28121.4 |
| large conductance mechanosensitive channel protein mscl | FBD94_08845 | Not Available | Negative | 2283160 - 2283591 | 15133.0 |
| rna polymerase factor sigma-54 | FBD94_08850 | Not Available | Positive | 2283942 - 2285414 | 56708.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

