Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uracil-dna glycosylase | FBD94_08755 | Not Available | Positive | 2267105 - 2267782 | 25104.8 |
| lrp/asnc family transcriptional regulator | FBD94_08760 | Not Available | Negative | 2267949 - 2268419 | 17972.2 |
| metal-dependent transcriptional regulator | FBD94_08765 | Not Available | Positive | 2268557 - 2269210 | 24839.1 |
| iron/manganese transporter | FBD94_08770 | Not Available | Positive | 2269212 - 2271083 | 68564.0 |
| ssra-binding protein smpb | FBD94_08775 | Not Available | Positive | 2271101 - 2271556 | 17710.8 |
| protein-l-isoaspartate(d-aspartate) o-methyltransferase | FBD94_08780 | Not Available | Negative | 2271564 - 2272220 | 24691.8 |
| primosomal protein n' | FBD94_08785 | Not Available | Negative | 2272321 - 2274795 | 94055.6 |
| duf423 domain-containing protein | FBD94_08790 | Not Available | Negative | 2274798 - 2275184 | 14169.8 |
| hypothetical protein | FBD94_08795 | Not Available | Positive | 2275294 - 2276868 | 59554.6 |
| hypothetical protein | FBD94_08800 | Not Available | Positive | 2276883 - 2278325 | 53905.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

