Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nicotinamide mononucleotide adenylyltransferase | FBD94_08455 | Not Available | Negative | 2199356 - 2200666 | 48988.5 |
| abc transporter atp-binding protein | FBD94_08460 | Not Available | Positive | 2200754 - 2202454 | 63629.6 |
| mechanosensitive ion channel | FBD94_08465 | Not Available | Negative | 2202451 - 2203329 | 33142.5 |
| ribonuclease r | FBD94_08470 | Not Available | Positive | 2203431 - 2205563 | 80672.1 |
| polyprenyl synthetase family protein | FBD94_08475 | Not Available | Positive | 2205595 - 2206563 | 36251.6 |
| response regulator | FBD94_08480 | Not Available | Negative | 2206567 - 2207529 | 36459.4 |
| helix-turn-helix transcriptional regulator | FBD94_08485 | Not Available | Positive | 2207737 - 2208105 | 14036.7 |
| 50s ribosomal protein l27 | FBD94_08490 | Not Available | Negative | 2208303 - 2208689 | 13516.4 |
| 50s ribosomal protein l21 | FBD94_08495 | Not Available | Negative | 2208746 - 2209057 | 11408.0 |
| hypothetical protein | FBD94_08500 | Not Available | Negative | 2209140 - 2209664 | 20024.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

