Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ix secretion system membrane protein porp/sprf | FBD94_08305 | Not Available | Positive | 2167568 - 2168551 | 36661.5 |
| hypothetical protein | FBD94_08310 | Not Available | Negative | 2168569 - 2169729 | 45012.4 |
| hypothetical protein | FBD94_08315 | Not Available | Negative | 2169756 - 2169992 | 9169.23 |
| nad(p)/fad-dependent oxidoreductase | FBD94_08320 | Not Available | Positive | 2170317 - 2171456 | 42657.4 |
| methyltransferase domain-containing protein | FBD94_08325 | Not Available | Positive | 2171450 - 2172166 | 27684.0 |
| type iii polyketide synthase | FBD94_08330 | Not Available | Positive | 2172163 - 2173215 | 39238.9 |
| beta-hydroxyacyl-acp dehydratase | FBD94_08335 | Not Available | Positive | 2173366 - 2173812 | 16008.5 |
| beta-ketoacyl-[acyl-carrier-protein] synthase family protein | FBD94_08340 | Not Available | Positive | 2173805 - 2175082 | 45024.7 |
| acyl carrier protein | FBD94_08345 | Not Available | Positive | 2175075 - 2175338 | 9889.9 |
| 4-phosphopantetheinyl transferase family protein | FBD94_08350 | Not Available | Positive | 2175325 - 2175795 | 17706.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

