Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_08255 | Not Available | Negative | 2158472 - 2158699 | 7753.07 |
| hypothetical protein | FBD94_08260 | Not Available | Negative | 2158793 - 2159281 | 18487.5 |
| hypothetical protein | FBD94_08265 | Not Available | Negative | 2159432 - 2159791 | 13884.1 |
| crp/fnr family transcriptional regulator | FBD94_08270 | Not Available | Negative | 2159896 - 2160546 | 25461.6 |
| helix-turn-helix transcriptional regulator | FBD94_08275 | Not Available | Negative | 2160707 - 2161687 | 36913.8 |
| hypothetical protein | FBD94_08280 | Not Available | Negative | 2161641 - 2162123 | 18574.1 |
| plp-dependent aminotransferase family protein | FBD94_08285 | Not Available | Positive | 2162265 - 2163731 | 55205.7 |
| hypothetical protein | FBD94_08290 | Not Available | Positive | 2164135 - 2165805 | 56524.6 |
| hypothetical protein | FBD94_08295 | Not Available | Positive | 2165833 - 2166597 | 26157.0 |
| t9ss type b sorting domain-containing protein | FBD94_08300 | Not Available | Positive | 2166616 - 2167566 | 34380.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

