Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FBD94_08205 | Not Available | Positive | 2145776 - 2146351 | 22892.8 |
| duf4974 domain-containing protein | FBD94_08210 | Not Available | Positive | 2146400 - 2147623 | 45001.1 |
| helix-turn-helix transcriptional regulator | FBD94_08215 | Not Available | Negative | 2147678 - 2148040 | 14140.0 |
| rna polymerase sigma-70 factor | FBD94_08220 | Not Available | Positive | 2148680 - 2149276 | 23280.2 |
| duf4974 domain-containing protein | FBD94_08225 | Not Available | Positive | 2149338 - 2150444 | 41011.6 |
| susc/raga family tonb-linked outer membrane protein | FBD94_08230 | Not Available | Positive | 2150652 - 2153957 | 121217.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_08235 | Not Available | Positive | 2153968 - 2155347 | 51484.0 |
| redoxin domain-containing protein | FBD94_08240 | Not Available | Positive | 2155568 - 2157076 | 58062.0 |
| hypothetical protein | FBD94_08245 | Not Available | Negative | 2157068 - 2158126 | 40176.0 |
| hypothetical protein | FBD94_08250 | Not Available | Negative | 2158176 - 2158409 | 8290.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

