Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_08105 | Not Available | Positive | 2121655 - 2122152 | 19109.0 |
| insulinase family protein | FBD94_08110 | Not Available | Negative | 2122214 - 2125024 | 105545.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_08115 | Not Available | Negative | 2125126 - 2126559 | 54588.2 |
| susc/raga family tonb-linked outer membrane protein | FBD94_08120 | Not Available | Negative | 2126571 - 2130128 | 133206.0 |
| duf4974 domain-containing protein | FBD94_08125 | Not Available | Negative | 2130267 - 2131406 | 41686.7 |
| rna polymerase sigma-70 factor | FBD94_08130 | Not Available | Negative | 2131476 - 2132039 | 21544.3 |
| c-type cytochrome | FBD94_08135 | Not Available | Negative | 2132239 - 2132589 | 12202.1 |
| fatty acid hydroxylase | FBD94_08140 | Not Available | Negative | 2132657 - 2133271 | 24030.7 |
| hypothetical protein | FBD94_08145 | Not Available | Negative | 2133365 - 2135902 | 96413.1 |
| ring-cleaving dioxygenase | FBD94_08150 | Not Available | Positive | 2135973 - 2136908 | 35455.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

