Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna polymerase iii subunit epsilon | FBD94_08005 | Not Available | Negative | 2097607 - 2098977 | 51710.6 |
| response regulator | FBD94_08010 | Not Available | Positive | 2099128 - 2099493 | 13403.5 |
| osmc family protein | FBD94_08015 | Not Available | Negative | 2099557 - 2099958 | 14892.9 |
| hypothetical protein | FBD94_08020 | Not Available | Negative | 2100035 - 2100685 | 22083.5 |
| hypothetical protein | FBD94_08025 | Not Available | Negative | 2100813 - 2101046 | 8819.59 |
| dna polymerase iv | FBD94_08030 | Not Available | Negative | 2101093 - 2102196 | 41226.6 |
| histone h1 | FBD94_08035 | Not Available | Negative | 2102256 - 2102432 | 6414.72 |
| rna polymerase sigma factor rpod/siga | FBD94_08040 | Not Available | Negative | 2102538 - 2103398 | 32624.7 |
| endonuclease/exonuclease/phosphatase | FBD94_08045 | Not Available | Negative | 2103799 - 2104620 | 29676.9 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_08050 | Not Available | Negative | 2104624 - 2106210 | 60018.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

