Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2971 domain-containing protein | FBD94_07955 | Not Available | Positive | 2081175 - 2082074 | 34385.9 |
| hypothetical protein | FBD94_07960 | Not Available | Negative | 2082571 - 2087334 | 182849.0 |
| restriction endonuclease | FBD94_07965 | Not Available | Negative | 2087542 - 2088813 | 49643.0 |
| hypothetical protein | FBD94_07970 | Not Available | Negative | 2088813 - 2090849 | 77346.1 |
| hypothetical protein | FBD94_07975 | Not Available | Negative | 2090932 - 2091381 | 16601.0 |
| duf3732 domain-containing protein | FBD94_07980 | Not Available | Negative | 2091697 - 2093571 | 71171.9 |
| hypothetical protein | FBD94_07985 | Not Available | Negative | 2093568 - 2094020 | 17483.5 |
| hypothetical protein | FBD94_07990 | Not Available | Negative | 2094017 - 2095246 | 47454.6 |
| hypothetical protein | FBD94_07995 | Not Available | Positive | 2095474 - 2097246 | 68588.3 |
| Trna-arg | Not Available | Not Available | Positive | 2097447 - 2097520 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

