Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding protein | FBD94_07900 | Not Available | Positive | 2067059 - 2070013 | 109845.0 |
| hypothetical protein | FBD94_07905 | Not Available | Positive | 2070044 - 2070133 | 3096.66 |
| duf421 domain-containing protein | FBD94_07910 | Not Available | Negative | 2070140 - 2070832 | 26265.3 |
| paraquat-inducible protein a | FBD94_07915 | Not Available | Positive | 2070989 - 2072305 | 49785.6 |
| paraquat-inducible protein a | FBD94_07920 | Not Available | Positive | 2072295 - 2073587 | 48377.1 |
| csbd family protein | FBD94_07925 | Not Available | Negative | 2073620 - 2073805 | 7159.54 |
| chemotaxis protein cher | FBD94_07930 | Not Available | Negative | 2073900 - 2077136 | 121243.0 |
| serine/threonine protein kinase | FBD94_07935 | Not Available | Negative | 2077366 - 2078694 | 49302.2 |
| hypothetical protein | FBD94_07940 | Not Available | Negative | 2078898 - 2079164 | 9999.15 |
| hypothetical protein | FBD94_07950 | Not Available | Negative | 2080741 - 2080926 | 6951.43 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

