Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta hydrolase | FBD94_07685 | Not Available | Negative | 2013790 - 2014572 | 27779.2 |
| helix-turn-helix domain-containing protein | FBD94_07690 | Not Available | Negative | 2014647 - 2015525 | 34347.0 |
| adenylate/guanylate cyclase domain-containing protein | FBD94_07695 | Not Available | Positive | 2015711 - 2016874 | 44384.2 |
| sdr family nad(p)-dependent oxidoreductase | FBD94_07700 | Not Available | Positive | 2016905 - 2017918 | 36714.5 |
| helix-turn-helix transcriptional regulator | FBD94_07705 | Not Available | Positive | 2017987 - 2018820 | 32486.6 |
| acetolactate decarboxylase | FBD94_07710 | Not Available | Negative | 2018817 - 2019617 | 29764.5 |
| beta-lactamase family protein | FBD94_07715 | Not Available | Positive | 2019754 - 2020881 | 41606.1 |
| glycoside hydrolase family 32 protein | FBD94_07720 | Not Available | Negative | 2021271 - 2022806 | 57548.6 |
| glycoside hydrolase family 32 protein | FBD94_07725 | Not Available | Negative | 2022844 - 2024331 | 56157.6 |
| glycoside hydrolase family 32 protein | FBD94_07730 | Not Available | Negative | 2024342 - 2026474 | 79676.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

