Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_07635 | Not Available | Negative | 2006662 - 2007531 | 33262.8 |
| duf1801 domain-containing protein | FBD94_07640 | Not Available | Positive | 2007779 - 2008204 | 15967.2 |
| hypothetical protein | FBD94_07645 | Not Available | Positive | 2008247 - 2008603 | 13487.2 |
| duf1343 domain-containing protein | FBD94_07650 | Not Available | Positive | 2008624 - 2009853 | 45648.4 |
| hypothetical protein | FBD94_07655 | Not Available | Positive | 2009869 - 2010420 | 20529.7 |
| gnat family n-acetyltransferase | FBD94_07660 | Not Available | Negative | 2010494 - 2011012 | 20135.7 |
| crp/fnr family transcriptional regulator | FBD94_07665 | Not Available | Positive | 2011152 - 2011751 | 23305.2 |
| nadp oxidoreductase | FBD94_07670 | Not Available | Positive | 2011860 - 2012516 | 23214.0 |
| hypothetical protein | FBD94_07675 | Not Available | Positive | 2012527 - 2012994 | 17929.8 |
| hydrolase | FBD94_07680 | Not Available | Positive | 2013060 - 2013713 | 24104.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

