Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | FBD94_07480 | Not Available | Negative | 1966600 - 1969659 | 114105.0 |
| hypothetical protein | FBD94_07485 | Not Available | Negative | 1969684 - 1971063 | 51707.0 |
| galactose mutarotase | FBD94_07490 | Not Available | Negative | 1971506 - 1972642 | 41592.4 |
| glycosyl hydrolase | FBD94_07495 | Not Available | Negative | 1972679 - 1973911 | 45959.0 |
| hypothetical protein | FBD94_07500 | Not Available | Negative | 1973908 - 1975098 | 44520.2 |
| hypothetical protein | FBD94_07505 | Not Available | Negative | 1975105 - 1976673 | 57109.9 |
| histidine kinase | FBD94_07510 | Not Available | Positive | 1976963 - 1980148 | 121098.0 |
| response regulator transcription factor | FBD94_07515 | Not Available | Positive | 1980150 - 1980923 | 29553.8 |
| beta-xylosidase | FBD94_07520 | Not Available | Negative | 1980969 - 1982627 | 62162.7 |
| tlpa family protein disulfide reductase | FBD94_07525 | Not Available | Negative | 1982885 - 1984177 | 47738.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

