Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxidoreductase | FBD94_00670 | Not Available | Negative | 159695 - 160579 | 33572.4 |
| abc transporter atp-binding protein | FBD94_00675 | Not Available | Negative | 160592 - 161344 | 28319.3 |
| abc transporter permease | FBD94_00680 | Not Available | Negative | 161341 - 162075 | 26160.8 |
| sdr family oxidoreductase | FBD94_00685 | Not Available | Positive | 162255 - 162944 | 25060.1 |
| pspc domain-containing protein | FBD94_00690 | Not Available | Positive | 162966 - 163694 | 27388.5 |
| hypothetical protein | FBD94_00695 | Not Available | Positive | 163697 - 164638 | 35032.3 |
| rdd family protein | FBD94_00700 | Not Available | Positive | 164683 - 165300 | 23525.2 |
| (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | FBD94_00705 | Not Available | Positive | 165350 - 167341 | 73809.8 |
| hypothetical protein | FBD94_00710 | Not Available | Negative | 167338 - 168102 | 29588.7 |
| hypothetical protein | FBD94_00715 | Not Available | Negative | 168320 - 168610 | 11072.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

