Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoribosyltransferase | FBD94_07380 | Not Available | Negative | 1942256 - 1942906 | 23850.9 |
| universal stress protein | FBD94_07385 | Not Available | Negative | 1942899 - 1943768 | 32605.2 |
| hypothetical protein | FBD94_07390 | Not Available | Positive | 1943940 - 1944221 | 10688.5 |
| srpbcc domain-containing protein | FBD94_07395 | Not Available | Positive | 1944232 - 1944675 | 16706.4 |
| hypothetical protein | FBD94_07400 | Not Available | Negative | 1944738 - 1945058 | 11644.8 |
| hypothetical protein | FBD94_07405 | Not Available | Negative | 1945042 - 1945602 | 20883.8 |
| atp-binding cassette domain-containing protein | FBD94_07410 | Not Available | Positive | 1945890 - 1946627 | 26991.0 |
| methionine abc transporter permease meti | FBD94_07415 | Not Available | Positive | 1946620 - 1947276 | 23281.3 |
| metq/nlpa family lipoprotein | FBD94_07420 | Not Available | Positive | 1947297 - 1948109 | 29576.8 |
| cytochrome c | FBD94_07425 | Not Available | Negative | 1948131 - 1950350 | 82540.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

