Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma-70 factor | FBD94_07330 | Not Available | Negative | 1938077 - 1938682 | 23428.2 |
| hypothetical protein | FBD94_07335 | Not Available | Negative | 1938763 - 1938966 | 7335.39 |
| hypothetical protein | FBD94_07340 | Not Available | Positive | 1939107 - 1939307 | 7433.71 |
| prolyl 4-hydroxylase subunit alpha | FBD94_07345 | Not Available | Positive | 1939411 - 1940136 | 27856.7 |
| metal-binding protein | FBD94_07350 | Not Available | Positive | 1940138 - 1940383 | 9599.68 |
| ktsc domain-containing protein | FBD94_07355 | Not Available | Positive | 1940427 - 1940630 | 7726.49 |
| lmo0937 family membrane protein | FBD94_07360 | Not Available | Positive | 1940687 - 1940836 | 5337.05 |
| hypothetical protein | FBD94_07365 | Not Available | Negative | 1940833 - 1941123 | 10712.5 |
| hypothetical protein | FBD94_07370 | Not Available | Negative | 1941129 - 1941386 | 9850.6 |
| ferritin-like domain-containing protein | FBD94_07375 | Not Available | Positive | 1941567 - 1942091 | 19302.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

