Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix transcriptional regulator | FBD94_07280 | Not Available | Positive | 1922952 - 1923311 | 13597.7 |
| hypothetical protein | FBD94_07285 | Not Available | Negative | 1923316 - 1923888 | 21860.6 |
| duf763 domain-containing protein | FBD94_07290 | Not Available | Negative | 1924043 - 1925248 | 44560.6 |
| fad-dependent oxidoreductase | FBD94_07295 | Not Available | Negative | 1925307 - 1927301 | 74954.2 |
| sgnh/gdsl hydrolase family protein | FBD94_07300 | Not Available | Negative | 1927320 - 1928009 | 26340.1 |
| glycoside hydrolase family 92 protein | FBD94_07305 | Not Available | Negative | 1928011 - 1930236 | 83738.0 |
| hypothetical protein | FBD94_07310 | Not Available | Negative | 1930214 - 1931587 | 50208.2 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_07315 | Not Available | Negative | 1931600 - 1933243 | 61405.9 |
| tonb-dependent receptor | FBD94_07320 | Not Available | Negative | 1933248 - 1936694 | 127001.0 |
| duf4974 domain-containing protein | FBD94_07325 | Not Available | Negative | 1936821 - 1938026 | 45608.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

