Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_07230 | Not Available | Negative | 1914099 - 1914356 | 9522.68 |
| tetr/acrr family transcriptional regulator | FBD94_07235 | Not Available | Positive | 1914430 - 1914978 | 20863.2 |
| pentapeptide repeat-containing protein | FBD94_07240 | Not Available | Positive | 1914982 - 1915572 | 22402.2 |
| l-histidine n(alpha)-methyltransferase | FBD94_07245 | Not Available | Negative | 1915585 - 1916556 | 36796.1 |
| ergothioneine biosynthesis protein egtb | FBD94_07250 | Not Available | Negative | 1916565 - 1917716 | 45273.2 |
| gnat family n-acetyltransferase | FBD94_07255 | Not Available | Positive | 1917849 - 1918802 | 36071.5 |
| srpbcc domain-containing protein | FBD94_07260 | Not Available | Negative | 1918936 - 1919376 | 16508.4 |
| gluconate 2-dehydrogenase subunit 3 family protein | FBD94_07265 | Not Available | Negative | 1919481 - 1920098 | 22903.6 |
| gmc family oxidoreductase | FBD94_07270 | Not Available | Negative | 1920114 - 1921850 | 63757.9 |
| nad-dependent dehydratase | FBD94_07275 | Not Available | Negative | 1921992 - 1922870 | 31139.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

