Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3347 domain-containing protein | FBD94_07180 | Not Available | Positive | 1894474 - 1895007 | 19183.9 |
| citrate synthase | FBD94_07185 | Not Available | Positive | 1895131 - 1896417 | 48316.3 |
| hypothetical protein | FBD94_07190 | Not Available | Negative | 1896835 - 1905911 | 311504.0 |
| glycoside hydrolase | FBD94_07195 | Not Available | Negative | 1906416 - 1907528 | 41854.5 |
| l,d-transpeptidase | FBD94_07200 | Not Available | Negative | 1907684 - 1909096 | 53952.8 |
| abc-f family atp-binding cassette domain-containing protein | FBD94_07205 | Not Available | Positive | 1909326 - 1910921 | 60212.6 |
| pirin family protein | FBD94_07210 | Not Available | Positive | 1911012 - 1911884 | 31362.3 |
| group iii truncated hemoglobin | FBD94_07215 | Not Available | Negative | 1911954 - 1912346 | 14791.1 |
| no-inducible flavohemoprotein | FBD94_07220 | Not Available | Negative | 1912358 - 1913569 | 45121.3 |
| rrf2 family transcriptional regulator | FBD94_07225 | Not Available | Negative | 1913615 - 1914052 | 16029.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

