Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| kynureninase | FBD94_07130 | Not Available | Positive | 1884741 - 1886030 | 48122.5 |
| bestrophin | FBD94_07135 | Not Available | Positive | 1886075 - 1886935 | 32868.3 |
| histone deacetylase | FBD94_07140 | Not Available | Positive | 1886937 - 1887836 | 33539.3 |
| dna topoisomerase iii | FBD94_07145 | Not Available | Positive | 1887839 - 1889698 | 69434.5 |
| mbl fold metallo-hydrolase | FBD94_07150 | Not Available | Positive | 1889705 - 1890802 | 41705.4 |
| duf1801 domain-containing protein | FBD94_07155 | Not Available | Positive | 1890864 - 1891241 | 14518.7 |
| hypothetical protein | FBD94_07160 | Not Available | Positive | 1891232 - 1892035 | 30474.2 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | FBD94_07165 | Not Available | Positive | 1892054 - 1892989 | 35273.4 |
| porin family protein | FBD94_07170 | Not Available | Positive | 1893184 - 1893714 | 18694.3 |
| hypothetical protein | FBD94_07175 | Not Available | Positive | 1893868 - 1894377 | 17392.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

