Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_07075 | Not Available | Negative | 1875366 - 1877081 | 64021.1 |
| duf2652 domain-containing protein | FBD94_07080 | Not Available | Negative | 1877078 - 1878145 | 41231.5 |
| alpha/beta hydrolase | FBD94_07085 | Not Available | Positive | 1878280 - 1878978 | 24937.2 |
| mbl fold metallo-hydrolase | FBD94_07090 | Not Available | Positive | 1879021 - 1879758 | 27367.3 |
| dihydrofolate reductase | FBD94_07095 | Not Available | Positive | 1879869 - 1880462 | 21720.8 |
| duf1801 domain-containing protein | FBD94_07100 | Not Available | Positive | 1880839 - 1881198 | 13854.8 |
| dna-deoxyinosine glycosylase | FBD94_07105 | Not Available | Positive | 1881346 - 1881834 | 18879.5 |
| na+/h+ antiporter | FBD94_07110 | Not Available | Negative | 1881910 - 1883484 | 58260.6 |
| hypothetical protein | FBD94_07120 | Not Available | Negative | 1883806 - 1884081 | 10499.4 |
| hypothetical protein | FBD94_07125 | Not Available | Negative | 1884111 - 1884302 | 7260.79 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

