Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tlpa family protein disulfide reductase | FBD94_06975 | Not Available | Positive | 1848458 - 1849768 | 48777.8 |
| ahpc/tsa family protein | FBD94_06980 | Not Available | Positive | 1849770 - 1850780 | 37398.4 |
| hypothetical protein | FBD94_06985 | Not Available | Positive | 1850932 - 1851276 | 12661.0 |
| response regulator | FBD94_06990 | Not Available | Negative | 1851450 - 1853696 | 85087.9 |
| ahpc/tsa family protein | FBD94_06995 | Not Available | Negative | 1853724 - 1854317 | 22677.5 |
| sdr family oxidoreductase | FBD94_07000 | Not Available | Negative | 1854534 - 1855298 | 27314.8 |
| helix-turn-helix transcriptional regulator | FBD94_07005 | Not Available | Negative | 1855384 - 1855791 | 15636.6 |
| multidrug efflux smr transporter | FBD94_07010 | Not Available | Negative | 1855872 - 1856201 | 11790.0 |
| rna polymerase sigma-70 factor | FBD94_07015 | Not Available | Positive | 1856330 - 1856914 | 22696.6 |
| fecr family protein | FBD94_07020 | Not Available | Positive | 1856990 - 1858093 | 41091.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

