Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | FBD94_00625 | Not Available | Positive | 140902 - 143019 | 80473.9 |
| yihy/virulence factor brkb family protein | FBD94_00630 | Not Available | Negative | 143022 - 144047 | 37065.2 |
| hypothetical protein | FBD94_00635 | Not Available | Negative | 144049 - 146400 | 88332.5 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 146589 - 146688 | Not Available |
| translocation/assembly module tamb | FBD94_00640 | Not Available | Negative | 146384 - 151525 | 190286.0 |
| dna gyrase/topoisomerase iv subunit a | FBD94_00645 | Not Available | Positive | 151791 - 154940 | 117172.0 |
| m1 family metallopeptidase | FBD94_00650 | Not Available | Negative | 154946 - 157273 | 89624.2 |
| hupe/urej family protein | FBD94_00655 | Not Available | Negative | 157295 - 157882 | 22030.6 |
| hypothetical protein | FBD94_00660 | Not Available | Positive | 157949 - 158425 | 18459.0 |
| hypothetical protein | FBD94_00665 | Not Available | Negative | 158611 - 159669 | 39515.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

