Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_06875 | Not Available | Positive | 1819393 - 1819746 | 13455.2 |
| hypothetical protein | FBD94_06880 | Not Available | Negative | 1819758 - 1820189 | 14621.5 |
| hypothetical protein | FBD94_06885 | Not Available | Negative | 1820714 - 1823992 | 126736.0 |
| voc family protein | FBD94_06890 | Not Available | Negative | 1824394 - 1824834 | 16611.9 |
| helix-turn-helix transcriptional regulator | FBD94_06895 | Not Available | Negative | 1824975 - 1825781 | 30403.2 |
| aldo/keto reductase | FBD94_06900 | Not Available | Negative | 1825782 - 1826753 | 35141.4 |
| sensor histidine kinase | FBD94_06905 | Not Available | Negative | 1826904 - 1828163 | 46944.5 |
| rna polymerase sigma-70 factor | FBD94_06910 | Not Available | Positive | 1829060 - 1829659 | 23077.0 |
| duf4974 domain-containing protein | FBD94_06915 | Not Available | Positive | 1829882 - 1830922 | 38201.2 |
| susc/raga family tonb-linked outer membrane protein | FBD94_06920 | Not Available | Positive | 1831118 - 1834564 | 125836.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

