Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ai-2e family transporter | FBD94_06825 | Not Available | Negative | 1808266 - 1809399 | 41500.0 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | FBD94_06830 | Not Available | Positive | 1809493 - 1810863 | 49737.0 |
| hypothetical protein | FBD94_06835 | Not Available | Negative | 1810890 - 1811078 | 7185.67 |
| duf4393 domain-containing protein | FBD94_06840 | Not Available | Negative | 1811187 - 1812296 | 42051.7 |
| class i sam-dependent methyltransferase | FBD94_06845 | Not Available | Positive | 1812496 - 1813119 | 23337.2 |
| hypothetical protein | FBD94_06850 | Not Available | Negative | 1813361 - 1814065 | 27121.7 |
| duf4365 domain-containing protein | FBD94_06855 | Not Available | Negative | 1814524 - 1816482 | 75410.6 |
| eama family transporter | FBD94_06860 | Not Available | Positive | 1816859 - 1817794 | 33829.4 |
| duf4304 domain-containing protein | FBD94_06865 | Not Available | Negative | 1817972 - 1818583 | 23974.0 |
| hypothetical protein | FBD94_06870 | Not Available | Negative | 1818655 - 1819002 | 12850.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

