Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyl-coa thioesterase | FBD94_06775 | Not Available | Negative | 1793761 - 1794243 | 18922.8 |
| hsp20/alpha crystallin family protein | FBD94_06780 | Not Available | Positive | 1794331 - 1794765 | 16398.3 |
| serine/threonine protein kinase | FBD94_06785 | Not Available | Negative | 1794830 - 1796374 | 56738.3 |
| fha domain-containing protein | FBD94_06790 | Not Available | Negative | 1796384 - 1797178 | 29800.6 |
| cell cycle protein | FBD94_06795 | Not Available | Negative | 1797191 - 1801180 | 148029.0 |
| serine/threonine-protein phosphatase | FBD94_06800 | Not Available | Negative | 1801185 - 1802564 | 50377.7 |
| hypothetical protein | FBD94_06805 | Not Available | Negative | 1802659 - 1803609 | 36597.4 |
| arginine decarboxylase | FBD94_06810 | Not Available | Negative | 1803941 - 1805332 | 54007.5 |
| arginase | FBD94_06815 | Not Available | Positive | 1805435 - 1806385 | 34785.0 |
| arginine--trna ligase | FBD94_06820 | Not Available | Positive | 1806408 - 1808189 | 66883.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

