Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pas domain s-box protein | FBD94_06725 | Not Available | Positive | 1781971 - 1783023 | 40631.5 |
| response regulator | FBD94_06730 | Not Available | Positive | 1783072 - 1783512 | 16870.1 |
| phospho-sugar mutase | FBD94_06735 | Not Available | Negative | 1783524 - 1785257 | 63449.5 |
| aspartate kinase | FBD94_06740 | Not Available | Positive | 1785487 - 1786800 | 48566.5 |
| diaminopimelate decarboxylase | FBD94_06745 | Not Available | Positive | 1786990 - 1788141 | 43078.2 |
| hypothetical protein | FBD94_06750 | Not Available | Negative | 1788178 - 1788969 | 29128.3 |
| atpase | FBD94_06755 | Not Available | Negative | 1789012 - 1789392 | 14710.0 |
| duf3857 domain-containing protein | FBD94_06760 | Not Available | Negative | 1789379 - 1792066 | 103653.0 |
| acyl-coa dehydrogenase | FBD94_06765 | Not Available | Negative | 1792098 - 1793288 | 43902.0 |
| dihydroneopterin aldolase | FBD94_06770 | Not Available | Positive | 1793387 - 1793758 | 13995.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

