Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | FBD94_06675 | Not Available | Negative | 1771233 - 1771736 | 19941.9 |
| arac family transcriptional regulator | FBD94_06680 | Not Available | Positive | 1771888 - 1772703 | 31274.1 |
| sdr family oxidoreductase | FBD94_06685 | Not Available | Positive | 1772772 - 1773623 | 31375.8 |
| srpbcc domain-containing protein | FBD94_06690 | Not Available | Negative | 1773642 - 1774136 | 19442.1 |
| marr family transcriptional regulator | FBD94_06695 | Not Available | Negative | 1774191 - 1774652 | 17770.8 |
| gnat family n-acetyltransferase | FBD94_06700 | Not Available | Negative | 1774649 - 1775140 | 18302.1 |
| malate:quinone oxidoreductase | FBD94_06705 | Not Available | Positive | 1775366 - 1776874 | 55344.6 |
| asma family protein | FBD94_06710 | Not Available | Positive | 1776968 - 1779388 | 88988.8 |
| glutamate 5-kinase | FBD94_06715 | Not Available | Positive | 1779479 - 1780513 | 37131.0 |
| glutamate-5-semialdehyde dehydrogenase | FBD94_06720 | Not Available | Positive | 1780517 - 1781764 | 45678.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

