Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | FBD94_06625 | Not Available | Positive | 1758587 - 1759027 | 17113.6 |
| amidohydrolase | FBD94_06630 | Not Available | Negative | 1758991 - 1760739 | 64428.4 |
| hypothetical protein | FBD94_06635 | Not Available | Negative | 1760877 - 1761212 | 12673.6 |
| Trna-thr | Not Available | Not Available | Positive | 1761591 - 1761663 | Not Available |
| tonb-dependent receptor | FBD94_06645 | Not Available | Negative | 1761837 - 1764335 | 93512.5 |
| pepsy domain-containing protein | FBD94_06650 | Not Available | Negative | 1764347 - 1765477 | 42862.6 |
| duf4374 domain-containing protein | FBD94_06655 | Not Available | Negative | 1765557 - 1766765 | 44097.1 |
| tonb-dependent receptor | FBD94_06660 | Not Available | Negative | 1766798 - 1769191 | 90029.7 |
| hypothetical protein | FBD94_06665 | Not Available | Negative | 1769281 - 1770501 | 46230.3 |
| hypothetical protein | FBD94_06670 | Not Available | Negative | 1770485 - 1771141 | 24332.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

