Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ahpc/tsa family protein | FBD94_06525 | Not Available | Positive | 1730017 - 1731057 | 39071.2 |
| hypothetical protein | FBD94_06530 | Not Available | Negative | 1731141 - 1731371 | 8938.0 |
| nuclear transport factor 2 family protein | FBD94_06535 | Not Available | Negative | 1731592 - 1731954 | 13526.0 |
| rna polymerase sigma-70 factor | FBD94_06540 | Not Available | Positive | 1732154 - 1732744 | 23231.1 |
| duf4974 domain-containing protein | FBD94_06545 | Not Available | Positive | 1732847 - 1734001 | 43377.9 |
| susc/raga family tonb-linked outer membrane protein | FBD94_06550 | Not Available | Positive | 1734214 - 1737513 | 123393.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_06555 | Not Available | Positive | 1737535 - 1739028 | 55767.7 |
| duf4843 domain-containing protein | FBD94_06560 | Not Available | Positive | 1738985 - 1739893 | 34211.5 |
| hypothetical protein | FBD94_06565 | Not Available | Positive | 1739915 - 1741480 | 58403.3 |
| ahpc/tsa family protein | FBD94_06570 | Not Available | Positive | 1741498 - 1742622 | 41747.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

