Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)-dependent alcohol dehydrogenase | FBD94_06425 | Not Available | Positive | 1706632 - 1707678 | 38014.4 |
| 2og-fe(ii) oxygenase | FBD94_06430 | Not Available | Negative | 1707675 - 1708268 | 23262.7 |
| deoxyguanosinetriphosphate triphosphohydrolase | FBD94_06435 | Not Available | Positive | 1708353 - 1709696 | 50655.9 |
| aminoacyl-histidine dipeptidase | FBD94_06440 | Not Available | Positive | 1709800 - 1711254 | 52389.3 |
| serine acetyltransferase | FBD94_06445 | Not Available | Positive | 1711311 - 1712123 | 30056.2 |
| cysteine synthase cysm | FBD94_06450 | Not Available | Positive | 1712126 - 1712998 | 31746.1 |
| peptidase m23 | FBD94_06455 | Not Available | Positive | 1713026 - 1714279 | 47942.6 |
| pseudouridylate synthase | FBD94_06460 | Not Available | Positive | 1714314 - 1714991 | 25915.6 |
| chromosomal replication initiator protein dnaa | FBD94_06465 | Not Available | Positive | 1715188 - 1716621 | 54179.5 |
| Trna-glu | Not Available | Not Available | Positive | 1716756 - 1716830 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

