Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | FBD94_06375 | Not Available | Negative | 1692318 - 1692677 | 13319.4 |
| hypothetical protein | FBD94_06380 | Not Available | Negative | 1692995 - 1694038 | 41134.4 |
| llm class flavin-dependent oxidoreductase | FBD94_06385 | Not Available | Positive | 1694161 - 1695168 | 36592.8 |
| rna polymerase sigma-70 factor | FBD94_06390 | Not Available | Positive | 1695372 - 1695938 | 22244.2 |
| duf4974 domain-containing protein | FBD94_06395 | Not Available | Positive | 1696005 - 1697171 | 43001.6 |
| tonb-dependent receptor | FBD94_06400 | Not Available | Positive | 1697405 - 1700953 | 130593.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_06405 | Not Available | Positive | 1700962 - 1702665 | 63392.1 |
| duf5018 domain-containing protein | FBD94_06410 | Not Available | Positive | 1702637 - 1704373 | 62945.2 |
| hypothetical protein | FBD94_06415 | Not Available | Positive | 1704452 - 1705855 | 52879.2 |
| phosphatase pap2 family protein | FBD94_06420 | Not Available | Positive | 1705962 - 1706567 | 22099.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

