Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ytxh domain-containing protein | FBD94_06225 | Not Available | Negative | 1664372 - 1664557 | 6945.48 |
| beta-hexosaminidase | FBD94_06230 | Not Available | Positive | 1664720 - 1667035 | 87536.3 |
| gluconate transporter | FBD94_06235 | Not Available | Positive | 1667046 - 1668359 | 46223.9 |
| rida family protein | FBD94_06240 | Not Available | Positive | 1668371 - 1668844 | 17159.8 |
| d-ta family plp-dependent enzyme | FBD94_06245 | Not Available | Positive | 1668837 - 1669970 | 41571.2 |
| peptidase m19 | FBD94_06250 | Not Available | Positive | 1669974 - 1671044 | 39628.4 |
| nuclear transport factor 2 family protein | FBD94_06255 | Not Available | Positive | 1671057 - 1671425 | 13808.1 |
| 3-ketoacyl-acp reductase | FBD94_06260 | Not Available | Negative | 1671490 - 1672212 | 25494.8 |
| cold shock domain-containing protein | FBD94_06265 | Not Available | Negative | 1672356 - 1672547 | 6863.07 |
| alanyl-trna synthetase | FBD94_06270 | Not Available | Negative | 1672656 - 1672790 | 5172.65 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

