Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| enoyl-coa hydratase/isomerase family protein | FBD94_06175 | Not Available | Negative | 1653245 - 1654024 | 28211.9 |
| phosphatase pap2 family protein | FBD94_06180 | Not Available | Positive | 1654113 - 1654883 | 27773.2 |
| comec family competence protein | FBD94_06185 | Not Available | Negative | 1654913 - 1656760 | 70652.0 |
| helix-hairpin-helix domain-containing protein | FBD94_06190 | Not Available | Negative | 1656760 - 1658781 | 76687.7 |
| merr family transcriptional regulator | FBD94_06195 | Not Available | Negative | 1658847 - 1659182 | 13015.8 |
| alanine--trna ligase | FBD94_06200 | Not Available | Positive | 1659324 - 1662023 | 101814.0 |
| hypothetical protein | FBD94_06205 | Not Available | Negative | 1662106 - 1662348 | 9446.64 |
| nad-dependent deacylase | FBD94_06210 | Not Available | Negative | 1662415 - 1663104 | 25673.8 |
| hypothetical protein | FBD94_06215 | Not Available | Positive | 1663226 - 1663759 | 20419.5 |
| biopolymer transporter exbd | FBD94_06220 | Not Available | Positive | 1663847 - 1664362 | 18831.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

