Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| doxx family protein | FBD94_06075 | Not Available | Positive | 1625724 - 1626155 | 15991.3 |
| hypothetical protein | FBD94_06080 | Not Available | Positive | 1626205 - 1626807 | 21728.9 |
| pig-l family deacetylase | FBD94_06085 | Not Available | Positive | 1626950 - 1629391 | 89905.7 |
| sodium:solute symporter | FBD94_06090 | Not Available | Positive | 1629542 - 1631257 | 63350.3 |
| alpha/beta hydrolase | FBD94_06095 | Not Available | Negative | 1631254 - 1632066 | 30578.9 |
| hypothetical protein | FBD94_06100 | Not Available | Negative | 1632086 - 1632586 | 19199.4 |
| hypothetical protein | FBD94_06105 | Not Available | Positive | 1632723 - 1635053 | 87574.9 |
| duf4249 domain-containing protein | FBD94_06110 | Not Available | Positive | 1635094 - 1635840 | 27249.3 |
| gaf domain-containing sensor histidine kinase | FBD94_06115 | Not Available | Positive | 1635905 - 1637098 | 44242.6 |
| aldose 1-epimerase family protein | FBD94_06120 | Not Available | Negative | 1637099 - 1637965 | 33253.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

