Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cusa/czca family heavy metal efflux rnd transporter | FBD94_05920 | Not Available | Negative | 1594698 - 1599065 | 160118.0 |
| hypothetical protein | FBD94_05925 | Not Available | Negative | 1599156 - 1599479 | 11703.7 |
| magnesium transporter | FBD94_05930 | Not Available | Positive | 1599816 - 1601189 | 50906.7 |
| peptidylprolyl isomerase | FBD94_05935 | Not Available | Negative | 1601193 - 1601672 | 16988.3 |
| redox-regulated atpase ychf | FBD94_05940 | Not Available | Negative | 1601817 - 1602911 | 39922.8 |
| hypothetical protein | FBD94_05945 | Not Available | Positive | 1603011 - 1603490 | 17711.8 |
| duf2892 domain-containing protein | FBD94_05950 | Not Available | Negative | 1603471 - 1604169 | 26526.3 |
| hypothetical protein | FBD94_05955 | Not Available | Negative | 1604180 - 1604422 | 8902.27 |
| hypothetical protein | FBD94_05960 | Not Available | Positive | 1604533 - 1604985 | 18447.8 |
| tlpa family protein disulfide reductase | FBD94_05965 | Not Available | Positive | 1605057 - 1605533 | 17960.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

