Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | FBD94_05720 | Not Available | Positive | 1524677 - 1528759 | 155656.0 |
| hypothetical protein | FBD94_05725 | Not Available | Positive | 1528922 - 1530136 | 45160.3 |
| rna polymerase sigma-70 factor | FBD94_05730 | Not Available | Positive | 1530166 - 1530744 | 22957.6 |
| fecr family protein | FBD94_05735 | Not Available | Positive | 1530848 - 1532062 | 44402.1 |
| tonb-dependent receptor | FBD94_05740 | Not Available | Positive | 1532283 - 1535672 | 124075.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_05745 | Not Available | Positive | 1535699 - 1537123 | 52632.8 |
| rna polymerase sigma-70 factor | FBD94_05750 | Not Available | Positive | 1537336 - 1537914 | 22574.7 |
| fecr family protein | FBD94_05755 | Not Available | Positive | 1537989 - 1539128 | 41833.0 |
| tonb-dependent receptor | FBD94_05760 | Not Available | Positive | 1539386 - 1542766 | 125052.0 |
| ragb/susd family nutrient uptake outer membrane protein | FBD94_05765 | Not Available | Positive | 1542778 - 1544241 | 54477.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

