Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | FBD94_05570 | Not Available | Positive | 1484114 - 1485190 | 40089.4 |
| dehydratase | FBD94_05575 | Not Available | Positive | 1485201 - 1485641 | 16764.1 |
| l-fucose:h+ symporter permease | FBD94_05580 | Not Available | Positive | 1485672 - 1486985 | 47352.7 |
| dna-binding protein | FBD94_05585 | Not Available | Positive | 1486996 - 1490373 | 125471.0 |
| glycoside hydrolase family 127 protein | FBD94_05590 | Not Available | Positive | 1490412 - 1492430 | 75920.3 |
| ribulose 1,5-bisphosphate carboxylase | FBD94_05595 | Not Available | Positive | 1492442 - 1493686 | 44816.8 |
| four-carbon acid sugar kinase family protein | FBD94_05600 | Not Available | Positive | 1493700 - 1495082 | 49729.6 |
| aspartate/glutamate racemase family protein | FBD94_05605 | Not Available | Positive | 1495096 - 1495758 | 23117.5 |
| bile acid:sodium symporter family protein | FBD94_05610 | Not Available | Positive | 1495765 - 1497078 | 48080.7 |
| sialate o-acetylesterase | FBD94_05615 | Not Available | Positive | 1497065 - 1498516 | 52975.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

