Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin family protein | FBD94_05520 | Not Available | Positive | 1469535 - 1470716 | 45336.8 |
| duf255 domain-containing protein | FBD94_05525 | Not Available | Positive | 1470742 - 1471935 | 45636.6 |
| iclr family transcriptional regulator | FBD94_05530 | Not Available | Negative | 1472067 - 1472846 | 28635.9 |
| alpha-l-rhamnosidase | FBD94_05535 | Not Available | Positive | 1473064 - 1475835 | 103183.0 |
| glycosylase | FBD94_05540 | Not Available | Positive | 1475845 - 1476960 | 42829.9 |
| duf4982 domain-containing protein | FBD94_05545 | Not Available | Positive | 1476974 - 1479394 | 90907.3 |
| extracellular solute-binding protein | FBD94_05550 | Not Available | Positive | 1479404 - 1480564 | 43259.3 |
| coa transferase | FBD94_05555 | Not Available | Positive | 1480561 - 1481712 | 41933.6 |
| coa transferase | FBD94_05560 | Not Available | Positive | 1481716 - 1482879 | 42761.4 |
| extracellular solute-binding protein | FBD94_05565 | Not Available | Positive | 1482872 - 1484107 | 46100.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

