Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| six-hairpin glycosidase | FBD94_05370 | Not Available | Positive | 1422726 - 1424570 | 69358.6 |
| sialate o-acetylesterase | FBD94_05375 | Not Available | Positive | 1424582 - 1426048 | 54312.8 |
| glycoside hydrolase family 2 | FBD94_05380 | Not Available | Positive | 1426065 - 1428821 | 104245.0 |
| alpha-rhamnosidase | FBD94_05385 | Not Available | Positive | 1428855 - 1431596 | 102762.0 |
| duf3826 domain-containing protein | FBD94_05390 | Not Available | Positive | 1431633 - 1432283 | 23893.9 |
| sialidase | FBD94_05395 | Not Available | Positive | 1432309 - 1433442 | 41574.0 |
| acetylxylan esterase | FBD94_05400 | Not Available | Positive | 1433447 - 1434850 | 52421.3 |
| sugar phosphate isomerase/epimerase | FBD94_05405 | Not Available | Positive | 1434855 - 1435751 | 33390.9 |
| l-rhamnose mutarotase | FBD94_05410 | Not Available | Positive | 1435758 - 1438301 | 95061.8 |
| gfo/idh/moca family oxidoreductase | FBD94_05415 | Not Available | Positive | 1438464 - 1439549 | 40902.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

