Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ionic transporter y4ha | FBD94_05170 | Not Available | Positive | 1357113 - 1358195 | 37929.2 |
| hypothetical protein | FBD94_05175 | Not Available | Negative | 1358226 - 1358537 | 12462.3 |
| hypothetical protein | FBD94_05180 | Not Available | Negative | 1358695 - 1359624 | 36491.8 |
| hemolysin d | FBD94_05185 | Not Available | Negative | 1360154 - 1360792 | 23705.1 |
| hypothetical protein | FBD94_05190 | Not Available | Negative | 1360850 - 1361278 | 16427.0 |
| pp_01020 | FBD94_05195 | Not Available | Positive | 1361359 - 1361940 | Not Available |
| azurin | FBD94_05200 | Not Available | Positive | 1362005 - 1362523 | 18698.6 |
| hypothetical protein | FBD94_05205 | Not Available | Negative | 1362553 - 1362939 | 14409.0 |
| response regulator | FBD94_05210 | Not Available | Negative | 1363026 - 1364834 | 68542.6 |
| d-2-hydroxyacid dehydrogenase family protein | FBD94_05215 | Not Available | Negative | 1364982 - 1365926 | 35157.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

