Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter hiemivivus |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Pedobacter hiemivivus strain RP-1-16 contig36, whole genome
Gene Summary
Adenine Count
1965080 bp
Thymine Count
1938424 bp
Guanine Count
1297924 bp
Cytosine Count
1239067 bp
Genome Length
6440511 bp
Protein-coding Genes
5065 genes
Non-Coding Genes
66 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glucuronyl hydrolase | FBD94_05120 | Not Available | Positive | 1344546 - 1345715 | 44571.9 |
| laci family dna-binding transcriptional regulator | FBD94_05125 | Not Available | Negative | 1345722 - 1346783 | 40415.9 |
| phytanoyl-coa dioxygenase family protein | FBD94_05130 | Not Available | Negative | 1346864 - 1347661 | 29878.3 |
| mfs transporter | FBD94_05135 | Not Available | Negative | 1347666 - 1348898 | 44679.2 |
| arac family transcriptional regulator | FBD94_05140 | Not Available | Positive | 1349045 - 1349950 | 34646.4 |
| sugar phosphate isomerase/epimerase | FBD94_05145 | Not Available | Positive | 1349940 - 1350764 | 31711.2 |
| hypothetical protein | FBD94_05150 | Not Available | Negative | 1350753 - 1352939 | 81762.2 |
| sialate o-acetylesterase | FBD94_05155 | Not Available | Negative | 1352966 - 1354882 | 71290.2 |
| carbonic anhydrase | FBD94_05160 | Not Available | Negative | 1354997 - 1355746 | 27184.1 |
| aldo/keto reductase | FBD94_05165 | Not Available | Negative | 1355947 - 1356930 | 36047.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

