Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phage holin family protein | EZ437_04810 | Not Available | Negative | 1089562 - 1089906 | 11776.3 |
| hypothetical protein | EZ437_04815 | Not Available | Positive | 1089976 - 1090380 | 14873.0 |
| lrp/asnc family transcriptional regulator | EZ437_04820 | Not Available | Negative | 1090388 - 1090867 | 18101.2 |
| duf1543 domain-containing protein | EZ437_04825 | Not Available | Negative | 1091531 - 1092133 | 22794.3 |
| hypothetical protein | EZ437_04830 | Not Available | Positive | 1092253 - 1093977 | 64397.2 |
| hypothetical protein | EZ437_04835 | Not Available | Negative | 1093978 - 1094223 | 9212.01 |
| pepsy domain-containing protein | EZ437_04840 | Not Available | Negative | 1094220 - 1095566 | 50601.3 |
| tonb-dependent receptor | EZ437_04845 | Not Available | Negative | 1095581 - 1098019 | 90199.1 |
| ribosome assembly cofactor rimp | EZ437_04850 | Not Available | Positive | 1098516 - 1098980 | 17160.8 |
| transcription termination/antitermination protein nusa | EZ437_04855 | Not Available | Positive | 1098984 - 1100219 | 46669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

