Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rne/rng family ribonuclease | EZ437_04760 | Not Available | Negative | 1079903 - 1081453 | 58696.5 |
| hypothetical protein | EZ437_04765 | Not Available | Negative | 1081699 - 1082568 | 31336.2 |
| integration host factor subunit beta | EZ437_04770 | Not Available | Negative | 1082575 - 1082877 | 11089.5 |
| a/g-specific adenine glycosylase | EZ437_04775 | Not Available | Positive | 1083048 - 1084097 | 40534.8 |
| single-stranded dna-binding protein | EZ437_04780 | Not Available | Positive | 1084112 - 1084534 | 15690.6 |
| duf4270 domain-containing protein | EZ437_04785 | Not Available | Negative | 1084605 - 1086050 | 51790.9 |
| starch synthase | EZ437_04790 | Not Available | Negative | 1086069 - 1086893 | 31689.0 |
| pantoate--beta-alanine ligase | EZ437_04795 | Not Available | Positive | 1087045 - 1087905 | 31788.9 |
| aspartate 1-decarboxylase | EZ437_04800 | Not Available | Positive | 1087952 - 1088302 | 12956.8 |
| acyl-coa dehydrogenase | EZ437_04805 | Not Available | Positive | 1088401 - 1089540 | 41339.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

