Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Sphingobacteriia
Order
Sphingobacteriales
Family
Sphingobacteriaceae
Genus
Pedobacter
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Sphingobacteriia |
| Order | Sphingobacteriales |
| Family | Sphingobacteriaceae |
| Genus | Pedobacter |
| Species | Pedobacter psychroterrae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1484795 bp
Thymine Count
1488398 bp
Guanine Count
1086558 bp
Cytosine Count
1052445 bp
Genome Length
5112203 bp
Protein-coding Genes
4204 genes
Non-Coding Genes
47 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine phosphate synthase | EZ437_04710 | Not Available | Negative | 1067919 - 1068551 | 23376.8 |
| tonb-dependent receptor | EZ437_04715 | Not Available | Negative | 1068557 - 1070827 | 85178.9 |
| nadr | EZ437_04720 | Not Available | Negative | 1071062 - 1071589 | 20499.6 |
| nicotinamide riboside transporter pnuc | EZ437_04725 | Not Available | Negative | 1071573 - 1072190 | 24086.7 |
| hypothetical protein | EZ437_04730 | Not Available | Negative | 1072288 - 1072812 | 18922.6 |
| carboxypeptidase regulatory-like domain-containing protein | EZ437_04735 | Not Available | Positive | 1072972 - 1073289 | 11066.7 |
| carbamoyl-phosphate synthase large subunit | EZ437_04740 | Not Available | Positive | 1073506 - 1076322 | 104455.0 |
| duf3137 domain-containing protein | EZ437_04745 | Not Available | Negative | 1076349 - 1077311 | 36090.2 |
| lema family protein | EZ437_04750 | Not Available | Negative | 1077311 - 1077868 | 20771.0 |
| dna repair protein rada | EZ437_04755 | Not Available | Negative | 1078226 - 1079602 | 50328.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

